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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
DNase-seq
31
ChIP-seq
10
MeRIP-seq
1
ATAC-seq
Assay category
189
DNA accessibility
31
DNA binding
Target of assay
19
histone
19
histone modification
13
control
11
narrow histone mark
8
broad histone mark
5
nucleotide modification
4
RNA binding protein
4
transcription factor
Date released
406
November, 2017
322
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
196
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
224
bam
215
bigWig
212
bed narrowPeak
211
bigBed narrowPeak
188
bed bed3+
188
bed broadPeak
188
bigBed broadPeak
tsv
Organism
230
Homo sapiens
Biosample type
167
tissue
57
primary cell
6
cell line
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
26
epithelium
20
connective tissue
18
ureter
14
pancreas
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
230
AMP
Genome assembly (visualization)
212
GRCh38
189
hg19
Lab
220
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
32
inconsistent ontology term
files.file_type!
tsv
BIOSAMPLE
ASSAY
230 results
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Clear Filters
DNase-seq
ChIP-seq
MeRIP-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 35 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 18 more…
cell line
EndoC_BH1
6
See all biosamples
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