Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
20
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
19
histone
19
histone modification
13
control
narrow histone mark
8
broad histone mark
5
nucleotide modification
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
335
May, 2021
314
May, 2020
313
August, 2017
313
November, 2017
308
August, 2021
205
February, 2023
200
May, 2022
168
July, 2018
164
October, 2019
108
July, 2019
86
May, 2019
79
November, 2018
78
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
20
June, 2019
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
213
bam
204
bigWig
201
bed narrowPeak
200
bigBed narrowPeak
188
bed bed3+
188
bed broadPeak
bigBed broadPeak
4
tsv
Organism
35
Homo sapiens
Biosample type
25
primary cell
6
cell line
4
tissue
Organ
13
connective tissue
10
epithelium
10
pancreas
6
musculature of body
3
heart
2
eye
2
kidney
Project
35
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
25
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
20
inconsistent ontology term
files.file_type!
bigBed broadPeak
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
35 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
primary cell
mesenchymal stem cell
5
osteoblast
4
1
skeletal muscle satellite cell
5
cardiac fibroblast
3
cardiac muscle cell
2
+ See 3 more…
cell line
EndoC_BH1
6
tissue
islet of Langerhans
4
See all biosamples
Download