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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
26
total RNA-seq
14
ATAC-seq
12
ChIP-seq
1
single cell RNA-seq
Assay category
201
DNA accessibility
27
Transcription
12
DNA binding
Target of assay
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
259
May, 2021
213
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
239
bam
231
bigWig
205
bed narrowPeak
205
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
41
fastq
26
tsv
1
csv
Organism
240
Homo sapiens
Biosample type
163
tissue
77
primary cell
Organ
80
kidney
58
epithelium
44
pancreas
35
musculature of body
33
heart
32
limb
30
brain
18
ureter
10
connective tissue
7
vasculature
6
eye
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
240
AMP
Genome assembly (visualization)
231
GRCh38
208
hg19
Lab
240
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
target.investigated_as!
histone
BIOSAMPLE
ASSAY
240 results
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Clear Filters
DNase-seq
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
pancreatic beta cell
10
4
pancreatic alpha cell
10
3
pancreatic ductal cell
4
4
cardiac fibroblast
3
3
pancreatic acinar cell
2
3
+ See 22 more…
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