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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
182
DNase-seq
46
ChIP-seq
8
ATAC-seq
Assay category
190
DNA accessibility
46
DNA binding
Target of assay
31
histone
31
histone modification
18
broad histone mark
13
narrow histone mark
11
control
4
RNA binding protein
4
transcription factor
Date released
649
February, 2021
411
August, 2017
403
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
213
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
97
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
228
bam
219
bigWig
217
bed narrowPeak
211
bigBed narrowPeak
186
bed broadPeak
182
bed bed3+
182
bigBed broadPeak
17
fastq
14
tagAlign
Organism
236
Homo sapiens
Biosample type
183
tissue
53
primary cell
Organ
81
kidney
46
brain
43
musculature of body
35
heart
32
limb
20
epithelium
19
connective tissue
18
ureter
9
pancreas
7
eye
7
vasculature
blood vessel
2
adipose tissue
2
artery
2
liver
1
spleen
Project
236
AMP
Genome assembly (visualization)
219
GRCh38
196
hg19
Lab
235
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
26
inconsistent ontology term
Audit category:
4
missing controlled_by
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
236 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
brain
12
15
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
+ See 34 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 15 more…
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