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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
157
DNase-seq
17
ChIP-seq
7
ATAC-seq
Assay category
164
DNA accessibility
17
DNA binding
Target of assay
17
histone
17
histone modification
narrow histone mark
8
broad histone mark
6
control
3
RNA binding protein
3
transcription factor
Date released
649
February, 2021
368
November, 2017
332
May, 2021
323
August, 2017
314
May, 2020
216
August, 2021
200
May, 2022
174
June, 2019
169
February, 2023
168
July, 2018
167
October, 2019
88
November, 2018
83
July, 2019
78
December, 2017
71
May, 2019
65
October, 2018
59
September, 2020
58
September, 2018
57
November, 2019
54
March, 2020
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
22
February, 2020
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
April, 2019
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
175
bigWig
174
bam
168
bed narrowPeak
168
bigBed narrowPeak
157
bed bed3+
157
bed broadPeak
157
bigBed broadPeak
7
fastq
Organism
181
Homo sapiens
Biosample type
136
tissue
45
primary cell
Organ
80
kidney
39
musculature of body
heart
32
limb
30
brain
25
epithelium
18
ureter
14
connective tissue
11
pancreas
7
vasculature
6
eye
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
174
AMP
7
HPAP
Genome assembly (visualization)
175
GRCh38
148
hg19
Lab
174
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
15
inconsistent ontology term
organ_slims!
heart
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
181 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
renal cortex interstitium
11
+ See 28 more…
primary cell
mesenchymal stem cell
5
pancreatic alpha cell
5
skeletal muscle satellite cell
5
cardiac muscle cell
1
2
epithelial cell of proximal tubule
1
2
+ See 18 more…
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