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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
DNase-seq
43
single cell RNA-seq
21
ChIP-seq
6
total RNA-seq
Assay category
154
DNA accessibility
49
Transcription
21
DNA binding
Target of assay
11
histone
11
histone modification
7
narrow histone mark
6
control
4
RNA binding protein
4
broad histone mark
4
transcription factor
Date released
715
February, 2021
406
November, 2017
399
May, 2021
385
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
205
February, 2023
198
May, 2022
175
June, 2019
168
July, 2018
113
May, 2019
98
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
224
bam
218
bigWig
169
bed narrowPeak
169
bigBed narrowPeak
154
bed bed3+
154
bed broadPeak
154
bigBed broadPeak
49
tsv
44
fastq
Organism
224
Homo sapiens
Biosample type
137
tissue
87
primary cell
Organ
81
kidney
53
epithelium
musculature of body
43
pancreas
35
heart
32
limb
30
brain
20
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
224
AMP
Genome assembly (visualization)
218
GRCh38
195
hg19
Lab
224
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
224 results
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Clear Filters
DNase-seq
single cell RNA-seq
ChIP-seq
total RNA-seq
tissue
heart
18
kidney
13
brain
12
renal cortex interstitium
11
renal pelvis
10
+ See 31 more…
primary cell
cardiac fibroblast
3
5
mesenchymal stem cell
7
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
+ See 25 more…
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