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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
14
DNase-seq
Assay category
20
DNA binding
14
DNA accessibility
Target of assay
16
histone
16
histone modification
9
narrow histone mark
7
broad histone mark
4
RNA binding protein
4
transcription factor
1
chromatin remodeller
Date released
61
September, 2018
33
April, 2018
33
July, 2018
26
February, 2021
23
October, 2019
18
June, 2019
17
August, 2017
16
December, 2017
13
November, 2019
9
May, 2021
7
August, 2020
5
December, 2019
5
July, 2019
5
September, 2017
4
May, 2019
4
November, 2017
3
August, 2018
3
August, 2021
3
March, 2020
3
September, 2020
2
October, 2018
1
June, 2018
Available data
34
bam
34
bed narrowPeak
34
bigWig
32
bigBed narrowPeak
16
fastq
14
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
Organism
34
Homo sapiens
Biosample type
18
primary cell
16
in vitro differentiated cells
Organ
80
kidney
52
liver
41
musculature of body
34
epithelium
33
heart
32
limb
30
brain
18
ureter
15
connective tissue
9
embryo
7
vasculature
6
eye
5
blood vessel
4
pancreas
2
artery
1
adipose tissue
Project
34
AMP
Genome assembly (visualization)
34
GRCh38
28
hg19
Lab
34
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ChIP-seq
DNase-seq
primary cell
epithelial cell of proximal tubule
2
1
retinal pigment epithelial cell
2
1
glomerular visceral epithelial cell
2
kidney tubule cell
2
brain microvascular endothelial cell
1
+ See 7 more…
in vitro differentiated cells
hepatocyte
14
Hepatic endoderm
2
See all biosamples
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