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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
14
DNase-seq
6
ChIP-seq
6
WGBS
Assay category
26
Transcription
14
DNA accessibility
6
DNA binding
6
DNA methylation
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
46
bam
44
bigWig
32
tsv
18
bed narrowPeak
18
bigBed narrowPeak
14
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
6
fastq
Organism
52
Homo sapiens
Biosample type
26
cell line
26
primary cell
Organ
473
connective tissue
387
adipose tissue
150
bone element
101
heart
89
kidney
73
vasculature
71
blood vessel
68
artery
52
epithelium
43
musculature of body
38
limb
36
pancreas
30
brain
18
ureter
8
skeleton
7
eye
5
liver
Project
46
AMP
6
HPAP
Genome assembly (visualization)
44
GRCh38
38
hg19
Lab
46
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
30
inconsistent ontology term
month_released!
August, 2017
BIOSAMPLE
ASSAY
52 results
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total RNA-seq
DNase-seq
ChIP-seq
WGBS
cell line
EndoC_BH1
26
primary cell
pancreatic alpha cell
6
epithelial cell of proximal tubule
1
3
retinal pigment epithelial cell
1
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
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