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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
DNase-seq
6
ChIP-seq
6
RRBS
5
total RNA-seq
2
Hi-C
Assay category
14
DNA accessibility
6
DNA binding
6
DNA methylation
5
Transcription
2
3D chromatin structure
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
25
bam
25
bigWig
18
bed narrowPeak
18
bigBed narrowPeak
16
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
5
tsv
2
hdf5
Organism
33
Homo sapiens
Biosample type
33
primary cell
Organ
92
kidney
60
heart
53
musculature of body
48
brain
37
limb
36
connective tissue
33
epithelium
19
vasculature
18
ureter
16
blood vessel
13
adipose tissue
12
liver
10
pancreas
8
eye
5
artery
2
pericardium
Project
33
AMP
Genome assembly (visualization)
25
hg19
23
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
August, 2017
BIOSAMPLE
ASSAY
33 results
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Clear Filters
DNase-seq
ChIP-seq
RRBS
total RNA-seq
Hi-C
primary cell
epithelial cell of proximal tubule
1
3
1
1
retinal pigment epithelial cell
1
3
1
kidney epithelial cell
1
1
1
renal cortical epithelial cell
1
1
1
brain microvascular endothelial cell
1
1
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