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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
DNase-seq
7
ATAC-seq
6
ChIP-seq
Assay category
21
DNA accessibility
6
DNA binding
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
80
May, 2022
61
September, 2018
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
25
bigWig
20
bam
18
bed narrowPeak
18
bigBed narrowPeak
14
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
7
fastq
Organism
27
Homo sapiens
Biosample type
27
primary cell
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
27
epithelium
18
connective tissue
18
ureter
11
pancreas
7
eye
7
vasculature
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
20
AMP
7
HPAP
Genome assembly (visualization)
25
GRCh38
12
hg19
Lab
20
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
4
inconsistent ontology term
month_released!
February, 2023
BIOSAMPLE
ASSAY
27 results
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DNase-seq
ATAC-seq
ChIP-seq
primary cell
pancreatic alpha cell
5
epithelial cell of proximal tubule
1
3
retinal pigment epithelial cell
1
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
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