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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
14
DNase-seq
6
ChIP-seq
Assay category
53
DNA accessibility
41
DNA methylation
6
DNA binding
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
35
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
20
June, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
Available data
80
zippedFastqFolder
20
bam
18
bed narrowPeak
18
bigBed narrowPeak
18
bigWig
14
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
Organism
100
Homo sapiens
Biosample type
100
primary cell
Organ
108
pancreas
100
epithelium
81
kidney
45
musculature of body
42
liver
35
heart
32
limb
30
brain
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
1
adipose tissue
Project
80
HPAP
20
AMP
Genome assembly (visualization)
18
GRCh38
12
hg19
Lab
80
Klaus Kaestner, Upenn
20
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
100 results
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Clear Filters
WGBS
ATAC-seq
DNase-seq
ChIP-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
epithelial cell of proximal tubule
1
3
pancreatic acinar cell
4
retinal pigment epithelial cell
1
3
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