Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
13
DNase-seq
6
ChIP-seq
Assay category
52
DNA accessibility
41
DNA methylation
6
DNA binding
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
80
May, 2022
61
September, 2018
52
February, 2023
34
October, 2019
33
April, 2018
33
July, 2018
32
February, 2021
29
August, 2017
26
May, 2021
19
June, 2019
19
September, 2020
16
November, 2019
11
July, 2019
7
August, 2020
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
4
December, 2017
3
August, 2018
3
October, 2022
2
August, 2021
2
October, 2018
1
December, 2019
1
June, 2018
Available data
80
zippedFastqFolder
19
bam
17
bed narrowPeak
17
bigBed narrowPeak
17
bigWig
13
bed bed3+
13
bed broadPeak
13
bigBed broadPeak
Organism
99
Homo sapiens
Biosample type
99
primary cell
Organ
108
pancreas
100
epithelium
81
kidney
45
musculature of body
liver
35
heart
32
limb
30
brain
18
connective tissue
18
ureter
7
eye
7
vasculature
5
blood vessel
2
artery
1
adipose tissue
Project
80
HPAP
19
AMP
Genome assembly (visualization)
17
GRCh38
11
hg19
Lab
80
Klaus Kaestner, Upenn
19
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
99 results
search-icon
table-tab-icon
Clear Filters
WGBS
ATAC-seq
DNase-seq
ChIP-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
epithelial cell of proximal tubule
1
3
pancreatic acinar cell
4
retinal pigment epithelial cell
1
3
+ See 9 more…
See all biosamples
Download