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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
DNase-seq
9
total RNA-seq
6
ChIP-seq
6
RRBS
2
ATAC-seq
2
Hi-C
2
WGBS
Assay category
20
DNA accessibility
9
Transcription
8
DNA methylation
6
DNA binding
2
3D chromatin structure
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
98
February, 2021
87
February, 2023
80
May, 2022
61
October, 2019
61
September, 2018
55
May, 2019
33
April, 2018
33
July, 2018
29
August, 2017
26
May, 2021
24
June, 2019
21
July, 2019
19
December, 2017
19
September, 2020
16
November, 2019
12
August, 2021
9
March, 2020
7
August, 2020
6
December, 2019
6
November, 2017
6
November, 2020
5
September, 2017
3
August, 2018
3
February, 2020
3
October, 2022
2
October, 2018
1
June, 2018
Available data
37
bam
36
bigWig
24
bed narrowPeak
22
bigBed narrowPeak
20
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
9
tsv
7
bed bedMethyl
7
bigBed bedMethyl
2
hdf5
Organism
45
Homo sapiens
Biosample type
35
primary cell
10
tissue
Organ
92
kidney
60
heart
53
musculature of body
48
brain
37
limb
36
connective tissue
33
epithelium
19
vasculature
18
ureter
16
blood vessel
13
adipose tissue
12
liver
10
pancreas
8
eye
5
artery
2
pericardium
Project
45
AMP
Genome assembly (visualization)
35
hg19
34
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
45 results
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Clear Filters
DNase-seq
total RNA-seq
ChIP-seq
RRBS
ATAC-seq
Hi-C
WGBS
primary cell
epithelial cell of proximal tubule
1
1
3
1
retinal pigment epithelial cell
1
3
1
kidney epithelial cell
1
1
1
renal cortical epithelial cell
1
1
1
brain microvascular endothelial cell
1
1
+ See 11 more…
tissue
coronary artery
2
1
thoracic aorta
2
1
aorta
2
ascending aorta
1
1
See all biosamples
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