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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
total RNA-seq
30
DNase-seq
11
ChIP-seq
8
ATAC-seq
Assay category
52
Transcription
38
DNA accessibility
11
DNA binding
Target of assay
5
transcription factor
4
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
Date released
92
August, 2021
66
February, 2021
57
April, 2019
40
May, 2024
36
February, 2023
35
June, 2019
25
July, 2019
21
May, 2019
8
October, 2019
7
March, 2020
3
February, 2020
3
May, 2021
Available data
101
bam
89
bigWig
52
tsv
45
bed narrowPeak
33
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
6
tagAlign
Organism
101
Homo sapiens
Biosample type
66
cell line
27
tissue
8
primary cell
Organ
473
connective tissue
387
adipose tissue
150
bone element
101
heart
89
kidney
73
vasculature
71
blood vessel
68
artery
52
epithelium
43
musculature of body
38
limb
36
pancreas
30
brain
18
ureter
8
skeleton
7
eye
5
liver
Project
101
AMP
Genome assembly (visualization)
97
GRCh38
94
hg19
Lab
101
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
101 results
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total RNA-seq
DNase-seq
ChIP-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
heart
18
heart left ventricle
3
coronary artery
2
right atrium auricular region
2
heart right ventricle
1
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primary cell
cardiac fibroblast
3
5
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