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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
2
Hi-C
1
pCHi-C
1
total RNA-seq
Assay category
7
DNA accessibility
2
3D chromatin structure
1
Transcription
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
March, 2020
3
February, 2020
Available data
8
bam
8
bigWig
7
bed bed3+
7
bed broadPeak
7
bed narrowPeak
7
bigBed broadPeak
7
bigBed narrowPeak
2
bedpe bed3+
2
hic
2
tsv
Organism
11
Homo sapiens
Biosample type
6
tissue
5
primary cell
Organ
83
kidney
48
musculature of body
42
heart
32
brain
32
limb
26
epithelium
20
connective tissue
18
pancreas
18
ureter
11
vasculature
9
blood vessel
7
eye
5
liver
2
adipose tissue
2
artery
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
11
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
11 results
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Clear Filters
DNase-seq
Hi-C
pCHi-C
total RNA-seq
tissue
aorta
1
1
1
coronary artery
2
ascending aorta
1
primary cell
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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