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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
28
ChIP-seq
8
ATAC-seq
Assay category
195
DNA accessibility
28
DNA binding
Target of assay
31
histone
31
histone modification
broad histone mark
13
narrow histone mark
11
control
4
RNA binding protein
4
transcription factor
Date released
715
February, 2021
356
November, 2017
341
May, 2020
323
May, 2021
310
August, 2021
302
August, 2017
259
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
88
November, 2018
79
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
220
bam
211
bigWig
209
bed narrowPeak
203
bigBed narrowPeak
189
bed broadPeak
187
bed bed3+
187
bigBed broadPeak
11
fastq
4
tagAlign
Organism
223
Homo sapiens
Biosample type
176
tissue
47
primary cell
Organ
81
kidney
39
musculature of body
36
brain
35
heart
32
limb
20
epithelium
18
ureter
15
connective tissue
9
pancreas
7
eye
7
vasculature
5
blood vessel
2
adipose tissue
2
artery
2
liver
1
spleen
Project
223
AMP
Genome assembly (visualization)
211
GRCh38
187
hg19
Lab
222
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
18
inconsistent ontology term
Audit category:
1
missing controlled_by
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
223 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
heart
18
brain
12
5
muscle of arm
17
kidney
13
muscle of leg
13
+ See 36 more…
primary cell
cardiac fibroblast
3
5
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
retinal pigment epithelial cell
1
3
skeletal muscle satellite cell
4
+ See 17 more…
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