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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
ChIP-seq
5
total RNA-seq
1
Hi-C
Assay category
105
DNA binding
5
Transcription
DNA accessibility
1
3D chromatin structure
Target of assay
67
histone
67
histone modification
41
broad histone mark
26
narrow histone mark
20
transcription factor
18
control
10
RNA binding protein
6
chromatin remodeller
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
78
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
109
bam
91
bigWig
86
bed narrowPeak
85
bigBed narrowPeak
30
fastq
5
tsv
1
bedpe
1
hic
Organism
111
Homo sapiens
Biosample type
88
tissue
23
cell line
Organ
57
heart
23
kidney
18
blood
18
bodily fluid
7
spleen
5
liver
1
pancreas
Project
111
AMP
Genome assembly (visualization)
92
hg19
90
GRCh38
Lab
110
AMP-T2D consortium
1
Bing Ren, UCSD
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
111 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
tissue
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
spleen
7
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cell line
GM12878
18
HepG2
5
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