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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
12
ATAC-seq
1
Hi-C
Assay category
15
DNA binding
12
DNA accessibility
1
3D chromatin structure
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
18
fastq
16
bam
14
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
5
bed broadPeak
1
bedpe
1
hic
Organism
28
Homo sapiens
Biosample type
28
tissue
Organ
16
brain
10
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
28
AMP
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
22
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
28 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
tissue
brain
15
islet of Langerhans
5
1
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
spleen
1
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