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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ATAC-seq
1
Hi-C
Assay category
47
DNA accessibility
1
3D chromatin structure
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
30
bed narrowPeak
10
bed bed3
4
bed bed3+
3
bed bedgraph
3
bigWig
3
txt
1
bedpe
1
hic
Organism
48
Homo sapiens
Biosample type
36
tissue
12
in vitro differentiated cells
Organ
27
eye
12
epithelium
10
connective tissue
4
bone element
4
skeleton
3
pancreas
1
adipose tissue
1
brain
Project
48
AMP
Genome assembly (visualization)
48
hg19
37
GRCh38
Lab
42
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
2
Bing Ren, UCSD
1
Mark McCarthy, Oxford
Audit category:
3
inconsistent ontology term
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ATAC-seq
Hi-C
tissue
retina
15
pigmented layer of retina
12
islet of Langerhans
2
1
acetabular part of hip bone
1
adipose tissue
1
+ See 4 more…
in vitro differentiated cells
chondrocyte
5
immature adipocyte
2
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
embryonic stem cell
1
+ See 2 more…
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