Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
16
small RNA-seq
12
WGBS
10
ATAC-seq
6
RRBS
5
Hi-C
2
FAIRE-seq
Assay category
47
Transcription
18
DNA methylation
12
DNA accessibility
5
3D chromatin structure
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
65
bam
63
bigWig
47
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
1
bed broadPeak
1
bedpe
1
fastq
1
hic
Organism
82
Homo sapiens
Biosample type
82
tissue
primary cell
Organ
20
heart
11
brain
11
pancreas
10
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
vasculature
5
limb
4
kidney
1
artery
1
pericardium
Project
82
AMP
Genome assembly (visualization)
63
GRCh38
63
hg19
Lab
77
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
biosample_type!
primary cell
BIOSAMPLE
ASSAY
82 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
RRBS
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
4
2
1
islet of Langerhans
4
1
1
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
+ See 26 more…
See all biosamples
Download