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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
173
total RNA-seq
15
ATAC-seq
4
ChIP-seq
Assay category
173
Transcription
15
DNA accessibility
4
DNA binding
Target of assay
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
4
transcription factor
Date released
568
February, 2021
207
November, 2017
191
June, 2019
190
May, 2021
188
May, 2020
164
July, 2018
147
August, 2017
89
August, 2021
79
July, 2019
79
November, 2018
49
April, 2018
47
December, 2017
47
November, 2019
40
September, 2018
38
October, 2019
35
February, 2023
30
December, 2018
19
January, 2019
17
October, 2018
15
February, 2018
13
March, 2020
12
May, 2023
8
October, 2017
7
August, 2020
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
5
May, 2019
5
May, 2024
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
190
bam
177
bigWig
173
tsv
17
bed narrowPeak
4
tagAlign
Organism
192
Homo sapiens
Biosample type
83
in vitro differentiated cells
65
primary cell
40
tissue
4
cell line
Organ
43
pancreas
7
epithelium
3
heart
2
embryo
1
connective tissue
Project
141
AMP
51
T1D
Genome assembly (visualization)
203
hg19
192
GRCh38
Lab
139
AMP-T2D consortium
51
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
Audit category:
72
inconsistent ontology term
target.investigated_as!
histone
BIOSAMPLE
ASSAY
192 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
+ See 9 more…
primary cell
monocyte
51
13
embryonic stem cell
1
tissue
islet of Langerhans
36
2
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
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