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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
DNase-seq
3
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
24
DNA binding
3
Transcription
2
DNA accessibility
1
3D chromatin structure
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
3
control
Date released
80
May, 2022
61
September, 2018
52
February, 2023
33
April, 2018
33
July, 2018
32
February, 2021
30
October, 2019
29
August, 2017
26
May, 2021
19
December, 2017
19
September, 2020
16
November, 2019
13
July, 2019
7
August, 2020
6
August, 2021
6
December, 2019
6
June, 2019
6
March, 2020
6
November, 2017
6
November, 2020
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
June, 2018
0
March, 2019
Available data
29
bam
22
bigWig
18
bed narrowPeak
11
bigBed narrowPeak
3
tsv
2
bed broadPeak
2
bigBed broadPeak
1
hic
1
tar
Organism
30
Homo sapiens
Biosample type
29
primary cell
1
cell line
Organ
86
brain
65
limb
43
blood vessel
43
vasculature
40
nerve
30
epithelium
27
kidney
24
artery
22
pancreas
21
eye
19
vein
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
30
AMP
Genome assembly (visualization)
24
hg19
20
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
30 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
1
1
epithelial cell of proximal tubule
7
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
glomerular visceral epithelial cell
1
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