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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
242
ChIP-seq
30
total RNA-seq
25
ATAC-seq
10
DNase-seq
6
Hi-C
4
pCHi-C
1
FAIRE-seq
Assay category
25
DNA accessibility
Date released
102
February, 2023
100
May, 2020
77
May, 2022
76
August, 2021
34
May, 2021
25
November, 2019
22
February, 2021
21
October, 2019
14
September, 2018
11
May, 2023
7
August, 2020
7
October, 2017
6
July, 2019
5
September, 2017
4
August, 2017
4
March, 2019
4
March, 2020
3
September, 2020
2
January, 2018
1
November, 2020
Available data
7
bam
6
bed narrowPeak
4
bigWig
2
bigBed narrowPeak
1
bed broadPeak
1
fastq
Organism
25
Homo sapiens
Biosample type
19
tissue
4
in vitro differentiated cells
2
primary cell
Organ
7
pancreas
3
connective tissue
2
limb
adipose tissue
1
artery
1
blood vessel
1
brain
1
epithelium
1
eye
1
liver
1
nerve
1
pituitary gland
1
skin of body
1
vasculature
Project
25
AMP
Genome assembly (visualization)
10
hg19
8
GRCh38
Lab
21
AMP-T2D consortium
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
Audit category:
4
inconsistent ontology term
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
25 results
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Clear Filters
ATAC-seq
tissue
islet of Langerhans
17
tibial artery
1
tibial nerve
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
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