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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
135
total RNA-seq
48
single cell RNA-seq
Assay category
183
Transcription
10
3D chromatin structure
4
DNA accessibility
3
DNA binding
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
177
bam
177
bigWig
177
tsv
50
fastq
Organism
183
Homo sapiens
Biosample type
129
tissue
48
primary cell
4
cell line
2
in vitro differentiated cells
Organ
162
pancreas
35
epithelium
2
connective tissue
2
heart
2
musculature of body
1
blood vessel
1
liver
1
vasculature
Project
179
AMP
4
T1D
Genome assembly (visualization)
177
GRCh38
177
hg19
Lab
183
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
BIOSAMPLE
ASSAY
183 results
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total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
122
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 10 more…
cell line
EndoC_BH1
2
early embryonic cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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