Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
total RNA-seq
3
single cell RNA-seq
Assay category
245
DNA binding
48
Transcription
37
DNA accessibility
15
3D chromatin structure
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
32
bam
32
bigWig
32
tsv
3
fastq
Organism
48
Homo sapiens
Biosample type
31
tissue
8
cell line
5
primary cell
4
in vitro differentiated cells
Organ
14
eye
6
epithelium
6
kidney
6
pancreas
4
heart
4
limb
4
nerve
2
liver
2
musculature of body
1
blood vessel
1
brain
1
vasculature
Project
44
AMP
4
T1D
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
48
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
BIOSAMPLE
ASSAY
48 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
16
tibial nerve
4
heart
2
liver
2
psoas muscle
2
+ See 5 more…
cell line
EndoC_BH1
2
early embryonic cell
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
+ See 1 more…
primary cell
kidney glomerular epithelial cell
1
kidney tubule cell
1
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
See all biosamples
Download