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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
245
ChIP-seq
45
total RNA-seq
36
pCHi-C
26
ATAC-seq
15
Hi-C
10
DNase-seq
1
FAIRE-seq
Assay category
245
DNA binding
Target of assay
199
histone
199
histone modification
144
narrow histone mark
55
broad histone mark
39
control
7
recombinant protein
7
transcription factor
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
222
bam
179
bigWig
177
bed narrowPeak
58
bigBed narrowPeak
49
tagAlign
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
245
Homo sapiens
Biosample type
197
tissue
24
cell line
24
primary cell
Organ
84
brain
59
limb
40
blood vessel
40
vasculature
35
nerve
25
epithelium
23
artery
21
kidney
17
vein
16
pancreas
5
heart
5
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
242
AMP
3
T1D
Genome assembly (visualization)
181
hg19
179
GRCh38
Lab
245
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
BIOSAMPLE
ASSAY
245 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
35
islet of Langerhans
23
tibial artery
23
brain
5
heart
5
+ See 77 more…
cell line
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
EndoC_BH1
1
primary cell
endothelial cell of umbilical vein
17
epithelial cell of proximal tubule
7
See all biosamples
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