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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
222
ChIP-seq
45
total RNA-seq
36
pCHi-C
25
ATAC-seq
15
Hi-C
8
DNase-seq
1
FAIRE-seq
Assay category
222
DNA binding
Target of assay
181
histone
181
histone modification
140
narrow histone mark
41
broad histone mark
34
control
7
recombinant protein
7
transcription factor
Date released
406
November, 2017
296
August, 2017
219
October, 2019
165
May, 2021
115
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
6
September, 2017
3
March, 2020
2
February, 2021
Available data
199
bam
161
bigWig
159
bed narrowPeak
49
tagAlign
40
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
1
tagAlign bed3+
Organism
222
Homo sapiens
Biosample type
174
tissue
24
cell line
24
primary cell
Organ
84
brain
59
limb
40
blood vessel
40
vasculature
35
nerve
25
epithelium
artery
21
kidney
17
vein
16
pancreas
5
heart
5
liver
4
gonad
4
ovary
2
eye
1
connective tissue
1
lymph node
1
pituitary gland
Project
219
AMP
3
T1D
Genome assembly (visualization)
163
hg19
161
GRCh38
Lab
222
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
organ_slims!
artery
BIOSAMPLE
ASSAY
222 results
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Clear Filters
ChIP-seq
tissue
tibial nerve
35
islet of Langerhans
23
brain
5
heart
5
liver
5
+ See 76 more…
cell line
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
EndoC_BH1
1
primary cell
endothelial cell of umbilical vein
17
epithelial cell of proximal tubule
7
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