Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
pCHi-C
4
ChIP-seq
4
total RNA-seq
2
ATAC-seq
2
Hi-C
Assay category
4
DNA binding
4
Transcription
2
3D chromatin structure
2
DNA accessibility
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
128
February, 2021
90
May, 2021
26
June, 2019
23
October, 2019
22
November, 2019
17
March, 2020
11
February, 2023
8
May, 2020
6
July, 2018
6
November, 2020
4
December, 2017
3
August, 2021
3
May, 2019
2
December, 2019
2
July, 2019
1
February, 2020
1
June, 2018
Available data
11
tsv
9
bigWig
8
bam
4
bedpe bed3+
3
bed narrowPeak
2
bigBed narrowPeak
2
hic
2
ibed
Organism
20
Homo sapiens
Biosample type
7
cell line
7
in vitro differentiated cells
3
primary cell
2
tissue
1
stem cell
Organ
8
epithelium
5
kidney
5
pancreas
1
connective tissue
1
stomach
1
urinary bladder
Project
17
AMP
3
T1D
Genome assembly (visualization)
13
hg19
7
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
cell line
EndoC_BH1
1
2
2
RCC 7860 VHL
1
RCC 7860 vector
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
1
lymphocyte of B lineage (iPSC)
1
1
1
primary cell
kidney epithelial cell
3
tissue
bladder (urinary bladder)
1
gastric (mucosa of stomach)
1
stem cell
mesenchymal stem cell
1
Download