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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
total RNA-seq
10
Hi-C
4
ATAC-seq
2
pCHi-C
Assay category
11
Transcription
10
3D chromatin structure
4
DNA accessibility
Date released
574
February, 2021
281
November, 2017
276
August, 2017
217
October, 2019
215
May, 2020
187
June, 2019
180
May, 2021
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
31
February, 2018
30
December, 2018
27
March, 2020
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
15
bigWig
13
tsv
12
bedpe bed3+
11
bam
10
hic
2
ibed
Organism
27
Homo sapiens
Biosample type
16
tissue
6
in vitro differentiated cells
4
cell line
1
primary cell
Organ
6
pancreas
4
heart
4
musculature of body
3
blood vessel
3
epithelium
3
vasculature
2
liver
1
vein
Project
27
AMP
T1D
Genome assembly (visualization)
27
hg19
11
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
award.project!
T1D
BIOSAMPLE
ASSAY
27 results
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Clear Filters
total RNA-seq
Hi-C
ATAC-seq
pCHi-C
tissue
psoas muscle
2
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
islet of Langerhans
2
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
1
lymphocyte of B lineage (iPSC)
1
1
1
cell line
EndoC_BH1
2
early embryonic cell
2
primary cell
endothelial cell of umbilical vein
1
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