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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
pCHi-C
11
total RNA-seq
2
ATAC-seq
Assay category
11
Transcription
2
DNA accessibility
Date released
537
February, 2021
189
May, 2020
164
July, 2018
116
August, 2021
94
May, 2021
89
August, 2017
65
July, 2019
49
April, 2018
41
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
16
February, 2023
14
October, 2019
7
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
41
tsv
18
bigWig
14
bam
8
bedpe bed3+
8
hic
3
bed narrowPeak
Organism
41
Homo sapiens
Biosample type
28
tissue
9
cell line
in vitro differentiated cells
4
stem cell
Organ
6
pancreas
5
heart
3
epithelium
3
musculature of body
2
blood vessel
2
brain
2
connective tissue
2
intestine
2
kidney
2
liver
2
vasculature
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
39
AMP
2
T1D
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
41 results
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Clear Filters
pCHi-C
total RNA-seq
ATAC-seq
tissue
psoas muscle
1
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
liver
1
1
+ See 16 more…
cell line
EndoC_BH1
2
1
early embryonic cell
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
+ See 1 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
See all biosamples
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