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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
pCHi-C
13
total RNA-seq
Hi-C
4
ATAC-seq
3
ChIP-seq
Assay category
13
Transcription
4
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
689
February, 2021
406
November, 2017
343
August, 2017
341
May, 2020
303
October, 2019
274
August, 2021
267
May, 2021
218
June, 2019
200
May, 2022
189
February, 2023
168
July, 2018
120
May, 2019
100
July, 2019
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
September, 2020
54
November, 2019
51
December, 2017
49
April, 2018
48
March, 2020
47
September, 2023
40
May, 2024
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
December, 2019
7
August, 2020
4
January, 2018
4
March, 2019
4
March, 2023
3
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
41
tsv
18
bigWig
14
bam
3
bed narrowPeak
Organism
48
Homo sapiens
Biosample type
33
tissue
11
cell line
in vitro differentiated cells
4
stem cell
Organ
13
pancreas
5
epithelium
5
heart
3
musculature of body
2
blood vessel
2
brain
2
connective tissue
2
intestine
2
kidney
2
liver
2
vasculature
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
41
AMP
7
T1D
Genome assembly (visualization)
18
hg19
14
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
biosample_type!
in vitro differentiated cells
month_released!
November, 2018
assay_title!
Hi-C
BIOSAMPLE
ASSAY
48 results
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Clear Filters
pCHi-C
total RNA-seq
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
2
psoas muscle
1
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
+ See 16 more…
cell line
EndoC_BH1
2
2
1
early embryonic cell
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
+ See 1 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
See all biosamples
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