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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
Hi-C
3
ChIP-seq
2
ATAC-seq
2
pCHi-C
2
total RNA-seq
Assay category
9
3D chromatin structure
3
DNA binding
2
DNA accessibility
2
Transcription
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
397
November, 2017
266
October, 2019
263
August, 2017
192
August, 2021
163
June, 2019
115
February, 2021
115
May, 2019
113
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
72
May, 2021
66
May, 2022
50
May, 2020
47
September, 2023
41
November, 2019
35
December, 2018
30
July, 2019
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
18
March, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
September, 2017
5
March, 2019
4
July, 2018
4
March, 2023
1
August, 2018
1
August, 2022
1
December, 2019
1
October, 2022
Available data
tsv
20
bigWig
16
bam
11
bedpe bed3+
9
hic
3
bed narrowPeak
2
ibed
Organism
18
Homo sapiens
Biosample type
12
tissue
4
in vitro differentiated cells
2
cell line
primary cell
Organ
8
pancreas
2
epithelium
2
heart
2
musculature of body
1
blood vessel
1
liver
1
vasculature
Project
13
AMP
5
T1D
Genome assembly (visualization)
16
hg19
3
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
biosample_type!
primary cell
files.file_type!
tsv
BIOSAMPLE
ASSAY
18 results
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Clear Filters
Hi-C
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
tissue
islet of Langerhans
2
1
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
1
See all biosamples
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