Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
20
pCHi-C
9
total RNA-seq
7
Hi-C
2
ATAC-seq
Assay category
82
DNA binding
9
Transcription
7
3D chromatin structure
2
DNA accessibility
Target of assay
62
histone
62
histone modification
37
broad histone mark
25
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
88
bam
76
bigWig
67
bed narrowPeak
64
bigBed narrowPeak
28
tsv
7
bedpe bed3+
7
hic
Organism
120
Homo sapiens
Biosample type
120
tissue
11
cell line
8
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
64
heart
23
kidney
9
pancreas
5
musculature of body
3
blood vessel
3
liver
3
vasculature
2
brain
2
intestine
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
116
AMP
4
T1D
Genome assembly (visualization)
83
hg19
73
GRCh38
Lab
120
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
120 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
tissue
heart left ventricle
35
1
1
1
kidney
23
heart right ventricle
13
1
1
1
heart
9
islet of Langerhans
2
2
2
psoas muscle
1
2
2
aorta
1
1
1
liver
1
1
1
pancreas
1
1
1
Ammon's horn
1
adipose tissue
1
adrenal gland
1
bladder (urinary bladder)
1
dorsolateral prefrontal cortex
1
esophagus
1
gastric (mucosa of stomach)
1
lung
1
ovary
1
right cardiac atrium
1
sigmoid colon
1
small intestine
1
spleen
1
thymus
1
See all biosamples
Download