Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
3
ChIP-seq
2
pCHi-C
2
total RNA-seq
Assay category
10
3D chromatin structure
3
DNA binding
DNA accessibility
2
Transcription
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
406
November, 2017
311
August, 2017
265
October, 2019
192
May, 2021
120
May, 2019
114
August, 2021
107
February, 2021
101
May, 2022
96
February, 2023
94
December, 2017
80
April, 2019
78
November, 2018
74
October, 2018
56
September, 2020
52
May, 2020
47
September, 2023
35
December, 2018
35
July, 2019
33
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
17
March, 2020
15
November, 2019
15
October, 2017
10
November, 2020
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
July, 2018
4
May, 2023
4
October, 2022
1
August, 2018
1
December, 2019
1
March, 2019
Available data
tsv
16
bam
16
bigWig
12
bedpe bed3+
10
hic
3
bed narrowPeak
2
ibed
Organism
17
Homo sapiens
Biosample type
11
tissue
4
in vitro differentiated cells
1
cell line
1
primary cell
Organ
6
pancreas
2
blood vessel
2
epithelium
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
12
AMP
5
T1D
Genome assembly (visualization)
15
hg19
3
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
files.file_type!
tsv
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
Hi-C
ChIP-seq
pCHi-C
total RNA-seq
tissue
islet of Langerhans
2
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
Download