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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
2
ATAC-seq
2
pCHi-C
2
total RNA-seq
Assay category
10
3D chromatin structure
DNA binding
2
DNA accessibility
2
Transcription
Date released
200
May, 2022
189
February, 2023
187
June, 2019
153
August, 2021
148
February, 2021
102
May, 2020
61
May, 2021
59
September, 2020
56
October, 2019
47
September, 2023
43
July, 2019
28
November, 2019
26
August, 2017
19
April, 2020
18
November, 2018
16
January, 2021
16
March, 2020
15
May, 2023
15
September, 2018
12
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2018
1
December, 2019
Available data
tsv
17
bigWig
13
bam
12
bedpe bed3+
10
hic
2
ibed
Organism
16
Homo sapiens
Biosample type
10
tissue
4
in vitro differentiated cells
1
cell line
1
primary cell
Organ
5
pancreas
2
blood vessel
2
epithelium
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
2
T1D
Genome assembly (visualization)
14
hg19
Lab
16
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
files.file_type!
tsv
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
16 results
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Clear Filters
Hi-C
ATAC-seq
pCHi-C
total RNA-seq
tissue
islet of Langerhans
1
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
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