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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
2
Hi-C
1
pCHi-C
1
total RNA-seq
Assay category
6
DNA binding
2
3D chromatin structure
1
Transcription
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
March, 2020
3
February, 2020
Available data
7
bam
7
bigWig
6
fastq
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
2
bedpe bed3+
2
hic
2
tsv
Organism
10
Homo sapiens
Biosample type
7
primary cell
3
tissue
Organ
318
liver
93
brain
14
pancreas
12
epithelium
10
vasculature
7
blood vessel
7
heart
5
musculature of body
2
connective tissue
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
10
AMP
Genome assembly (visualization)
9
hg19
5
GRCh38
Lab
10
AMP-T2D consortium
month_released!
May, 2021
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ChIP-seq
Hi-C
pCHi-C
total RNA-seq
primary cell
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
endothelial cell of umbilical vein
1
tissue
aorta
1
1
1
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