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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
Assay category
91
DNA binding
Target of assay
202
histone modification
201
histone
109
broad histone mark
91
narrow histone mark
50
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
141
October, 2019
88
August, 2017
64
May, 2021
38
November, 2017
34
May, 2019
27
May, 2020
23
April, 2019
16
December, 2017
15
May, 2024
15
September, 2018
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
2
October, 2017
Available data
63
bigWig
55
bam
53
bed narrowPeak
52
fastq
29
tagAlign
15
bed broadPeak
12
bigBed narrowPeak
6
bed bed3+
5
bigBed broadPeak
Organism
89
Homo sapiens
Biosample type
52
tissue
22
primary cell
16
in vitro differentiated cells
1
cell line
Organ
37
pancreas
28
connective tissue
13
liver
12
adipose tissue
9
epithelium
7
musculature of body
Project
88
AMP
3
T1D
Genome assembly (visualization)
63
hg19
55
GRCh38
Lab
91
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
7
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
91 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
16
liver
13
subcutaneous abdominal adipose tissue
11
skeletal muscle tissue
7
pancreas
4
+ See 1 more…
primary cell
pancreatic endocrine cell
8
skeletal muscle myoblast
6
pancreatic alpha cell
4
pancreatic beta cell
4
in vitro differentiated cells
adipocyte
16
cell line
EndoC_BH1
1
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