Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
560
total RNA-seq
18
single cell RNA-seq
Assay category
578
Transcription
53
DNA accessibility
11
DNA binding
10
3D chromatin structure
6
DNA methylation
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
563
tsv
558
bam
558
bigWig
12
fastq
6
csv
5
txt
Organism
578
Homo sapiens
Biosample type
459
tissue
82
cell line
24
in vitro differentiated cells
13
primary cell
Organ
449
connective tissue
386
adipose tissue
58
bone element
54
heart
53
blood vessel
53
vasculature
52
artery
31
pancreas
28
epithelium
5
kidney
2
liver
2
musculature of body
Project
562
AMP
12
HPAP
4
T1D
Genome assembly (visualization)
558
GRCh38
558
hg19
Lab
566
AMP-T2D consortium
12
Klaus Kaestner, Upenn
Audit category:
48
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
578 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
islet of Langerhans
2
+ See 7 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
28
early embryonic cell
2
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
Langerhans cell
12
osteoblast
1
See all biosamples
Download