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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
pCHi-C
1
ATAC-seq
1
Hi-C
1
single cell RNA-seq
1
total RNA-seq
Assay category
2
Transcription
1
3D chromatin structure
1
DNA accessibility
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
2
bam
2
tsv
1
bed bed3
1
bed bed3+
1
bed narrowPeak
1
bedpe bed3+
1
bigWig
1
csv
1
hic
Organism
6
Homo sapiens
Biosample type
4
tissue
2
cell line
Organ
457
connective tissue
387
adipose tissue
150
bone element
73
heart
70
blood vessel
70
vasculature
66
artery
46
pancreas
38
epithelium
10
kidney
8
skeleton
6
limb
6
liver
5
musculature of body
2
brain
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
6
AMP
Genome assembly (visualization)
4
hg19
2
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
1
inconsistent replicate
BIOSAMPLE
ASSAY
6 results
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Clear Filters
pCHi-C
ATAC-seq
Hi-C
single cell RNA-seq
total RNA-seq
tissue
liver
1
1
1
1
cell line
HepG2
1
1
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