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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
total RNA-seq
9
Hi-C
2
ATAC-seq
2
ChIP-seq
2
pCHi-C
Assay category
11
Transcription
9
3D chromatin structure
2
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
548
February, 2021
307
May, 2021
275
November, 2017
260
May, 2020
259
August, 2017
190
October, 2019
175
June, 2019
131
July, 2018
93
May, 2019
78
July, 2019
71
November, 2018
65
April, 2019
61
December, 2017
57
August, 2021
45
November, 2019
45
October, 2018
39
May, 2022
33
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
26
March, 2020
16
April, 2018
13
October, 2017
11
September, 2018
6
November, 2020
3
January, 2018
3
March, 2019
2
June, 2018
2
September, 2017
1
May, 2023
Available data
15
bigWig
13
bam
12
tsv
11
bedpe bed3+
9
hic
2
bed narrowPeak
2
ibed
Organism
26
Homo sapiens
Biosample type
18
tissue
6
in vitro differentiated cells
2
cell line
Organ
11
pancreas
epithelium
4
heart
4
musculature of body
3
blood vessel
3
vasculature
2
liver
1
vein
Project
24
AMP
2
T1D
Genome assembly (visualization)
26
hg19
13
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
26 results
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Clear Filters
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
pCHi-C
tissue
islet of Langerhans
2
2
psoas muscle
2
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
1
lymphocyte of B lineage (iPSC)
1
1
1
cell line
early embryonic cell
2
See all biosamples
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