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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
ATAC-seq
3
ChIP-seq
3
pCHi-C
1
Hi-C
Assay category
5
Transcription
4
DNA accessibility
3
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
487
February, 2021
313
August, 2017
157
July, 2018
104
May, 2022
76
October, 2018
72
September, 2018
70
February, 2023
63
May, 2021
56
November, 2019
39
April, 2018
24
July, 2019
22
June, 2019
22
October, 2019
19
September, 2020
16
March, 2020
16
November, 2020
11
September, 2017
9
August, 2021
8
January, 2021
8
November, 2018
7
August, 2020
6
October, 2017
5
March, 2019
4
August, 2018
3
February, 2020
3
October, 2022
2
May, 2019
1
August, 2022
1
January, 2018
1
June, 2018
1
May, 2023
Available data
10
bigWig
8
tsv
6
bam
3
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
16
Homo sapiens
Biosample type
10
tissue
5
cell line
1
stem cell
Organ
14
pancreas
7
heart
6
epithelium
5
musculature of body
4
blood vessel
4
vasculature
3
liver
2
brain
2
connective tissue
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
9
AMP
7
T1D
Genome assembly (visualization)
11
hg19
6
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
16 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
2
2
2
pancreas
1
1
1
adipose tissue
1
cell line
EndoC_BH1
2
2
1
stem cell
mesenchymal stem cell
1
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