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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
24
DNA binding
4
Transcription
1
3D chromatin structure
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
406
November, 2017
322
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
196
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
39
bam
39
fastq
31
bigWig
16
bed narrowPeak
tsv
1
hic
Organism
25
Homo sapiens
Biosample type
24
in vitro differentiated cells
2
cell line
2
stem cell
1
primary cell
Organ
9
embryo
Project
24
AMP
4
community
1
ITG
Genome assembly (visualization)
17
GRCh38
16
hg19
Lab
24
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
Audit category:
2
inconsistent control read length
files.file_type!
tsv
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
in vitro differentiated cells
pancreatic endoderm
9
definitive endodermal cell
3
embryonic stem cell
3
endocrine cell
3
posterior foregut
3
+ See 1 more…
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
primary cell
chondrocytes
1
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