Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
total RNA-seq
3
Hi-C
2
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
24
Transcription
3
3D chromatin structure
2
DNA binding
Target of assay
2
control
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
59
bam
bed narrowPeak
31
bigWig
20
tsv
3
hic
2
bedpe bed3+
Organism
25
Homo sapiens
Biosample type
20
tissue
6
cell line
2
stem cell
1
primary cell
Organ
24
pancreas
4
epithelium
Project
24
AMP
4
community
1
ITG
Genome assembly (visualization)
22
hg19
21
GRCh38
Lab
24
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
Audit category:
4
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
Hi-C
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
tissue
islet of Langerhans
19
1
cell line
EndoC_BH1
1
1
2
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
primary cell
chondrocytes
1
Download