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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
1
ATAC-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
4
Transcription
1
3D chromatin structure
1
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
6
bam
bigWig
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
hic
Organism
12
Homo sapiens
Biosample type
8
cell line
4
tissue
2
primary cell
2
stem cell
Organ
10
pancreas
6
epithelium
1
connective tissue
Project
11
AMP
4
community
1
ITG
Genome assembly (visualization)
2
GRCh38
1
hg19
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
1
AMP-T2D consortium
1
ITG
Audit category:
6
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
16 results
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Clear Filters
MeRIP-seq
ATAC-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
cell line
EndoC_BH1
6
EndoC-BH1
1
1
tissue
islet of Langerhans
4
primary cell
chondrocytes
1
osteoblast
1
stem cell
SB Ad3.1
1
1
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