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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ATAC-seq
2
Hi-C
2
total RNA-seq
Assay category
9
DNA accessibility
2
3D chromatin structure
2
Transcription
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
0
March, 2023
Available data
9
bam
7
bed narrowPeak
4
bigWig
2
bedpe bed3+
2
bigBed narrowPeak
2
hic
2
tsv
Organism
13
Homo sapiens
Biosample type
282
tissue
48
cell line
35
primary cell
13
in vitro differentiated cells
2
stem cell
Organ
2
connective tissue
Project
13
AMP
Genome assembly (visualization)
13
hg19
9
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
BIOSAMPLE
ASSAY
13 results
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ATAC-seq
Hi-C
total RNA-seq
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
cardiac precursors (cardiac muscle cell)
1
1
1
cardiomyocytes (cardiac muscle cell)
1
1
1
adipocyte
2
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