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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
15
total RNA-seq
3
Hi-C
Assay category
16
DNA binding
15
Transcription
3
3D chromatin structure
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
narrow histone mark
Date released
574
February, 2021
316
May, 2021
281
November, 2017
276
August, 2017
260
May, 2020
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
0
March, 2023
Available data
31
bam
31
bigWig
31
fastq
16
bed narrowPeak
15
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
34
Homo sapiens
Biosample type
31
in vitro differentiated cells
3
primary cell
Organ
10
embryo
3
epithelium
3
pancreas
Project
31
AMP
3
HPAP
Genome assembly (visualization)
34
hg19
32
GRCh38
Lab
31
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
in vitro differentiated cells
pancreatic endoderm
6
4
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
+ See 2 more…
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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