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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
11
ATAC-seq
3
single cell RNA-seq
1
total RNA-seq
Assay category
115
DNA binding
11
DNA accessibility
4
Transcription
Target of assay
89
histone
89
histone modification
56
broad histone mark
33
narrow histone mark
22
control
4
RNA binding protein
4
transcription factor
Date released
545
February, 2021
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
115
bam
93
bed narrowPeak
93
bigBed narrowPeak
93
bigWig
Organism
130
Homo sapiens
Biosample type
130
tissue
5
primary cell
Organ
50
blood vessel
50
vasculature
28
brain
21
heart
14
kidney
7
limb
7
musculature of body
5
artery
2
pancreas
1
adipose tissue
1
connective tissue
Project
130
AMP
Genome assembly (visualization)
104
GRCh38
94
hg19
Lab
116
AMP-T2D consortium
14
Katalin Susztak, Upenn
month_released!
August, 2017
BIOSAMPLE
ASSAY
130 results
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ChIP-seq
ATAC-seq
single cell RNA-seq
total RNA-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
kidney
11
3
angular gyrus
13
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