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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
120
DNA binding
4
Transcription
1
3D chromatin structure
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
23
control
5
RNA binding protein
5
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
120
bam
97
bed narrowPeak
97
bigBed narrowPeak
97
bigWig
1
hic
Organism
121
Homo sapiens
Biosample type
115
tissue
6
primary cell
2
cell line
2
stem cell
Organ
50
blood vessel
50
vasculature
28
brain
21
heart
7
limb
7
musculature of body
5
artery
5
epithelium
5
kidney
2
pancreas
Project
120
AMP
4
community
1
ITG
Genome assembly (visualization)
97
GRCh38
97
hg19
Lab
120
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
Audit category:
3
inconsistent ontology term
month_released!
February, 2020
BIOSAMPLE
ASSAY
125 results
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Clear Filters
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 6 more…
primary cell
kidney epithelial cell
5
chondrocytes
1
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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