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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
200
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
Assay category
200
DNA binding
4
Transcription
2
DNA accessibility
Target of assay
152
histone
152
histone modification
95
broad histone mark
57
narrow histone mark
42
control
11
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
205
bam
167
bigWig
164
bed narrowPeak
162
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
216
Homo sapiens
Biosample type
199
tissue
11
primary cell
6
cell line
Organ
78
heart
50
blood vessel
50
vasculature
28
brain
28
kidney
12
pancreas
11
epithelium
7
limb
7
musculature of body
6
connective tissue
5
artery
Project
216
AMP
Genome assembly (visualization)
168
hg19
166
GRCh38
Lab
206
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
9
inconsistent ontology term
month_released!
December, 2019
BIOSAMPLE
ASSAY
216 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
heart left ventricle
35
kidney
23
ascending aorta
16
thoracic aorta
16
temporal lobe
15
+ See 11 more…
primary cell
osteoblast
4
1
1
kidney epithelial cell
5
cell line
EndoC_BH1
6
See all biosamples
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