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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
5
RRBS
4
Hi-C
2
small RNA-seq
2
total RNA-seq
1
WGBS
Assay category
29
DNA binding
6
DNA methylation
4
3D chromatin structure
4
Transcription
Target of assay
25
histone
25
histone modification
16
broad histone mark
9
narrow histone mark
4
control
Date released
43
June, 2019
26
August, 2017
10
July, 2019
7
May, 2019
5
March, 2020
2
February, 2020
2
May, 2022
1
January, 2018
Available data
24
bigWig
19
bed narrowPeak
15
tagAlign
13
bed broadPeak
12
bam
6
bigBed narrowPeak
4
bed bedMethyl
4
bigBed bedMethyl
4
tsv
2
fastq
Organism
43
Homo sapiens
Biosample type
40
tissue
3
primary cell
Organ
196
pancreas
143
connective tissue
69
adipose tissue
64
liver
62
vasculature
61
blood vessel
47
epithelium
46
brain
46
heart
43
musculature of body
16
kidney
12
limb
8
artery
2
pericardium
1
eye
Project
43
AMP
Genome assembly (visualization)
26
hg19
10
GRCh38
Lab
43
AMP-T2D consortium
BIOSAMPLE
ASSAY
43 results
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ChIP-seq
RRBS
Hi-C
small RNA-seq
total RNA-seq
WGBS
tissue
skeletal muscle tissue
22
4
1
1
muscle of leg
7
1
gastrocnemius medialis
4
primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
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